Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944854.1_cds_XP_016487565.1_78283
CDS Infomation

[gene=LOC107807655] [db_xref=GeneID:107807655] [protein=cysteine proteinase 15A-like] [partial=5'] [protein_id=XP_016487565.1] [location=complement(join(1361..1632,1725..1968,2048..2167,3223..>3714))] [gbkey=CDS]
Sequence

TTAAGCGTTACAATTCTAACATGCGTATTTTCTCTCCTTTCATTCCAACATGCAGCAGCA
ATAATTCCAGAAGATTTCAAAATCTGGCAAGTCACTGACGACCAAAACTACCCAACAACC
ACCGCTTCAGCCGTTAACCACCACCACAACCTCCTCGGCACCGCCACCGAACACCGGTTC
AAGTCGTTCATACAAGAATACAGTAAAGAGTATACTACACGCGAGGAGTATATACACCGT
CTCGGGGTTTTTGCTAAGAATCTATTAAAGGCAGCTGAACACCAGGCTTTGGATCCTGCG
GCTGTTCATGGAGTTACTCAGTTCTCTGATTTAACGGAAGAGGAATTTGAGAAGATGTAT
ATGGGTGTTAAAGGTGTTGGCCGGGCGACTTCCTTGTTGGGGCAGGGACACGCGCCGCCG
CTGGAAGTGAAGGGATTGCCGGAGAGTTTTGATTGGAGAGAGAAAGGTGCTGTTACTGAG
GTCAAGATGCAGGGGACTTGCGGATCATGCTGGGCGTTTAGCACGACTGGATCCATTGAA
GGAGCCAACTTCATTGCTACCGGCAAGCTTCTTAATCTTAGTGAACAACAACTTGTAGAT
TGTGATCACACGTGTGACATAAAGGACAAAAAAGCATGTGATTCTGGATGCTCGGGAGGC
CTAATGACGAATGCTTACAAGTACTTAATTGAGGCAGGAGGAATAGAAGAGGAAGATTCA
TATCCATATACTGGTAAACGCGGCGACTGCAAGTTTAATCCAGACAAAGTCGCTGTAAAA
GTTTCGAACTTCACCAATATTCCCATCGATGAGCAACAAATCGCTGCTTATTTAGTCAAT
CATGGACCACTCGCAGTCGGGTTGAACGCTGTGTTTATGCAAACGTACATCGGAGGTGTA
TCGTGTCCGCTAATATGTGGAAAGAGGTGGATAAACCACGGAGTTTTGCTAGTTGGTTAT
GGCTCGAAGGGGTTCTCGATTTTGAGATTGAGCAACCAGCCATATTGGATCATAAAGAAC
TCGTGGGGAAAGCGATGGGGCGAACAAGGCTACTACAAGCTTTGTAGAGGACATGGCATG
TGTGGAATGAACACAATGGTTTCAGCTGTAATGACCCAAACCTCCTAA

Peptide Sequence

PEP ID

XP_016487565.1
PEP Infomation

PREDICTED: cysteine proteinase 15A-like, partial [Nicotiana tabacum]
Sequence

LSVTILTCVFSLLSFQHAAAIIPEDFKIWQVTDDQNYPTTTASAVNHHHNLLGTATEHRF
KSFIQEYSKEYTTREEYIHRLGVFAKNLLKAAEHQALDPAAVHGVTQFSDLTEEEFEKMY
MGVKGVGRATSLLGQGHAPPLEVKGLPESFDWREKGAVTEVKMQGTCGSCWAFSTTGSIE
GANFIATGKLLNLSEQQLVDCDHTCDIKDKKACDSGCSGGLMTNAYKYLIEAGGIEEEDS
YPYTGKRGDCKFNPDKVAVKVSNFTNIPIDEQQIAAYLVNHGPLAVGLNAVFMQTYIGGV
SCPLICGKRWINHGVLLVGYGSKGFSILRLSNQPYWIIKNSWGKRWGEQGYYKLCRGHGM
CGMNTMVSAVMTQTS

Transcript Sequence

Gene sequence data has not been registered.